The detailed information of tRNA gene sequence


Sequence ID>C11101311
Genome IDAP012029
Search identical group
Phylum/ClassChloroflexota
SpeciesAnaerolinea thermophila UNI-1 [AP012029]
Start position on genome 2725469
End posion on genome 2725380
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aggcaagtct
tRNA gene sequence 
GGAGAGGTAGCGTAGTCTGGCCTAACGCGCGCGCCTGGAGAGCGCGTGTACCGCAAGGTA
CCGTGGGTTCGAATCCCACCCTCTCCGCCT
Downstream region at tRNA end position 
ttttgtttta
Secondary structure (Cloverleaf model)
>C11101311	Ser	GGA
                   t      GCCT ttttgtttta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C T G A        A      | | | | |     G
  T         T G C G       G T G G G     C
  G         | | | |                 T T
  G         A C G C
    C C T A        G     TGTACCGCAAGGTACC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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