The detailed information of tRNA gene sequence


Sequence ID>C11101689
Genome IDCP002634
Search identical group
Phylum/ClassBacillota
SpeciesBacillus amyloliquefaciens LL3 [CP002634]
Start position on genome 471193
End posion on genome 471283
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gagccattat
tRNA gene sequence 
GGAGAAGTACTCAAGTGGCTGAAGAGGCGCCCCTGCTAAGGGTGTAGGTCGCGTAAGCGG
CGCGAGGGTTCAAATCCCTCCTTCTCCGCCA
Downstream region at tRNA end position 
gataagttct
Secondary structure (Cloverleaf model)
>C11101689	Ser	GCT
                   t      GCCA gataagttct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | | | | |     A
    G       A C T C       G A G G G     C
    G         | | |                 T T
    C       A G A G
      T G A        G     TAGGTCGCGTAAGCGGCGC
                    C - G
                    G + T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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