The detailed information of tRNA gene sequence


Sequence ID>C11103130
Genome IDCP002874
Search identical group
Phylum/ClassSpirochaetota
SpeciesBrachyspira intermedia PWS/A [CP002874]
Start position on genome 1815466
End posion on genome 1815392
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ttatataatc
tRNA gene sequence 
GGGGGTTTAGCTCAGTTTGGGAGAGCGACTGCCTTGCACGCAGTAGGTCGTGGGTTCGAT
CCCCATAACCTCCACat
Downstream region at tRNA end position 
cggtcataaa
Secondary structure (Cloverleaf model)
>C11103130	Ala	TGC
                   c      ACat cggtcataaa
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     T - A
                     T - A          C T
                    T     T A C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G T G G G     C
    T       | | | |                 T T
    G       G A G C
      G G A        G     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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