The detailed information of tRNA gene sequence


Sequence ID>C11103538
Genome IDFQ312005
Search identical group
Phylum/ClassBdellovibrionota
SpeciesHalobacteriovorax marinus SJ [FQ312005]
Start position on genome 44452
End posion on genome 44539
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cctaaacagc
tRNA gene sequence 
GGTGGATTGGCTGAGTGGTCGAAAGCGGTGGTTTTGAAAACCATTGACCTTCACGGGTCC
GCAGGTTCGAATCCTGTGTCCACCGCCA
Downstream region at tRNA end position 
ttttttgggc
Secondary structure (Cloverleaf model)
>C11103538	Ser	TGA
                   c      GCCA ttttttgggc
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     A - T
                     T + G          T A
                    T     T G T C C     A
      T G A        G      + | | | |     G
    G       G T C G       G C A G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TGACCTTCACGGGTCC
                    G + T
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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