The detailed information of tRNA gene sequence


Sequence ID>C11103539
Genome IDFQ312005
Search identical group
Phylum/ClassBdellovibrionota
SpeciesHalobacteriovorax marinus SJ [FQ312005]
Start position on genome 44568
End posion on genome 44658
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atacaattgc
tRNA gene sequence 
GGAGACATGCCCGAGTGGCCGAAGGGAGCACCTTGCTAAGGTGTCGAACCGTCTGACGGT
TCCGAGAGTTCGAATCTCTCTGTCTCCGCCA
Downstream region at tRNA end position 
ttctttatct
Secondary structure (Cloverleaf model)
>C11103539	Ser	GCT
                   c      GCCA ttctttatct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     A - T          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G C C C       G A G A G     C
    G         | | |                 T T
    C       A G G G
      C G A        A     CGAACCGTCTGACGGTTCC
                    G + T
                    C - G
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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