The detailed information of tRNA gene sequence


Sequence ID>C11103555
Genome IDFQ312005
Search identical group
Phylum/ClassBdellovibrionota
SpeciesHalobacteriovorax marinus SJ [FQ312005]
Start position on genome 2804804
End posion on genome 2804880
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cacgaaatgc
tRNA gene sequence 
GGGGGAGTAGTTAAGTTGGTTATAACGTCGCCCTGTCACGGCGAAGGCCGCGGGTTCGAG
TCCCGTCTCTCCCGCCA
Downstream region at tRNA end position 
ttttatactt
Secondary structure (Cloverleaf model)
>C11103555	Asp	GTC
                   c      GCCA ttttatactt
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       A T T G       G C G G G     C
    G       | | | |                 T T
    G       T A A C
      T T A        G     AGGCC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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