The detailed information of tRNA gene sequence


Sequence ID>C11103564
Genome IDFQ312005
Search identical group
Phylum/ClassBdellovibrionota
SpeciesHalobacteriovorax marinus SJ [FQ312005]
Start position on genome 3306848
End posion on genome 3306772
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ctttccctaa
tRNA gene sequence 
GGGTGTATAGCTCCAATTGGTAGAGCGGCTGATTCCAAATCAGTAGGTTGGGGGTTCGAG
TCCCTCTGCACCCGCCA
Downstream region at tRNA end position 
cttaaatgtc
Secondary structure (Cloverleaf model)
>C11103564	Trp	CCA
                   a      GCCA cttaaatgtc
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     T + G
                     A - T          T G
                    T     C T C C C     A
      A A C        A      | + | | |     G
    T       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     AGGTT
                    G + T
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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