The detailed information of tRNA gene sequence


Sequence ID>C11103976
Genome IDCP002530
Search identical group
Phylum/ClassBacteroidota
SpeciesPhocaeicola salanitronis DSM 18170 [CP002530]
Start position on genome 3990582
End posion on genome 3990495
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
agtcattctt
tRNA gene sequence 
GGAGAGATGCCGGAGTGGTCGATCGGGCCGCACTCGAAATGCGGTGAACGGGTAACTGTT
CCCAGGGTTCGAATCCCTGTTTCTCCGCtg
Downstream region at tRNA end position 
ataatctttt
Secondary structure (Cloverleaf model)
>C11103976	Ser	CGA
                   t      GCtg ataatctttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     A - T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G G C C       C A G G G     C
    G       + | | |                 T T
    T       T C G G
      C G A        G     TGAACGGGTAACTGTTCC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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