The detailed information of tRNA gene sequence


Sequence ID>C11104002
Genome IDCP002530
Search identical group
Phylum/ClassBacteroidota
SpeciesPhocaeicola salanitronis DSM 18170 [CP002530]
Start position on genome 276324
End posion on genome 276234
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcagcttatt
tRNA gene sequence 
GGAAGTTTGGGTGAGTGGCTGAAACCAGCAGTTTGCTAAACTGCCGTACGGATTTCCCGT
ACCGGGGGTTCGAATCCCCCAGCTTCCGCAA
Downstream region at tRNA end position 
gcaattcaaa
Secondary structure (Cloverleaf model)
>C11104002	Ser	GCT
                   t      GCAA gcaattcaaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T + G
                     T - A          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G G G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTACGGATTTCCCGTACC
                    G - C
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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