The detailed information of tRNA gene sequence


Sequence ID>C11105505
Genome IDCP003001
Search identical group
Phylum/ClassBacillota
SpeciesCaldicellulosiruptor acetigenus 6A [CP003001]
Start position on genome 324246
End posion on genome 324154
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agaaatatca
tRNA gene sequence 
AGAGAGATGGCCGAGTGGTCGAAGGCGCACGACTGGAAATCGTGTGTACCCCCAAAAGGG
GTACCGAGGGTTCAAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tttttattgg
Secondary structure (Cloverleaf model)
>C11105505	Ser	GGA
                   a      GCCA tttttattgg
                     A   C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     A
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TGTACCCCCAAAAGGGGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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