The detailed information of tRNA gene sequence


Sequence ID>C11105810
Genome IDCP002347
Search identical group
Phylum/ClassDeferribacterota
SpeciesCalditerrivibrio nitroreducens DSM 19672 [CP002347]
Start position on genome 1188653
End posion on genome 1188729
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cttctccatt
tRNA gene sequence 
CGGGGCGTAGCGCAGTTTGGTAGCGCATCGGTCTTGGGAACCGAGGGTCGGAGGTTCAAG
TCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
ttaaacttcc
Secondary structure (Cloverleaf model)
>C11105810	Pro	TGG
                   t      ACCA ttaaacttcc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T C T C C     A
      T G A        A      + | | | |     A
    T       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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