The detailed information of tRNA gene sequence


Sequence ID>C11107271
Genome IDAE000513
Search identical group
Phylum/ClassDeinococcota
SpeciesDeinococcus radiodurans R1 [AE000513, AE001825]
Start position on genome 2045580
End posion on genome 2045669
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aatcagccgt
tRNA gene sequence 
GGAACGGTGTCCGAGTGGTTGAAGGAGCACGCCTGGAAAGCGTGTATAGGGGCAACTCTA
TCGAGGGTTCGAATCCCTCTCGTTCCGCCA
Downstream region at tRNA end position 
aaacagagaa
Secondary structure (Cloverleaf model)
>C11107271	Ser	GGA
                   t      GCCA aaacagagaa
                     G - C
                     G - C
                     A - T
                     A - T
                     C - G
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    T       A G G A
      T G A        G     TATAGGGGCAACTCTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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