The detailed information of tRNA gene sequence


Sequence ID>C11107411
Genome IDCP002543
Search identical group
Phylum/ClassAquificota
SpeciesDesulfurobacterium thermolithotrophum DSM 11699 [CP002543]
Start position on genome 705184
End posion on genome 705090
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
accattctta
tRNA gene sequence 
GGAGAGGTGGCCGAGCTGGCTGAAGGCGCCCGCCTGCTAAGCGGGTGTACGGGTGAAAGC
CCGTACCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
tttatagttt
Secondary structure (Cloverleaf model)
>C11107411	Ser	GCT
                   a      GCCA tttatagttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
    T C G A        G      | | | | |     G
  G         G C C G       G C G G G     C
  G           | | |                 T T
  C         A G G C
    T G A          G     TGTACGGGTGAAAGCCCGTACC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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