The detailed information of tRNA gene sequence


Sequence ID>C11107472
Genome IDCP002297
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesNitratidesulfovibrio vulgaris RCH1 [CP002297]
Start position on genome 1373114
End posion on genome 1373021
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tcctttttct
tRNA gene sequence 
GGAAGCGTTTTCTATCCGGTGATAGGCCCGGTCTTCAAAACCGGTGGTAGGTCGAGAGGT
CTACGGTAGGTTCGACTCCTATACGCTTCCGCCA
Downstream region at tRNA end position 
atagcatacc
Secondary structure (Cloverleaf model)
>C11107472	SeC	TCA
                   t      GCCA atagcatacc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     T - A          T C
                    T     T A T C C     A
      C C T        T      + | | | |     G
    G       A T C T       G T A G G     C
    G       | | | +                 T T
    T       T A G G
      G A          C     TGGTAGGTCGAGAGGTCTACG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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