The detailed information of tRNA gene sequence


Sequence ID>W11107003
Genome IDACWM01000033
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesDesulfovibrio sp. 6_1_46AFAA [ACWM]
Start position on genome 39892
End posion on genome 39799
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
cctacggcgg
tRNA gene sequence 
GGGGACGTGTCGTCACCGGTGTGGCGCCCGGTCTTCAAAACCGGTGGCAGGCTTTACGGT
CTGCGGTAGGTTCGACTCCTATGCGTCCCCGCCA
Downstream region at tRNA end position 
aacaaggttc
Secondary structure (Cloverleaf model)
>W11107003	SeC(p)	TCA
                   g      GCCA aacaaggttc
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C
                     T + G          T C
                    G     T A T C C     A
      C C A        T      + | | | |     G
    G       C T G C       G T A G G     C
    G       | + | |                 T T
    T       G G C G
      G T          C     TGGCAGGCTTTACGGTCTGCG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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