The detailed information of tRNA gene sequence


Sequence ID>W1510645441
Genome IDCVOA01000009
Search identical group
Phylum/ClassChlamydiota
SpeciesChlamydia trachomatis H1IMS [CVOA]
Start position on genome 13859
End posion on genome 13772
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gaatcccact
tRNA gene sequence 
GGAGGGCTGACCGAGCGGCCGAAGGTGACGGTCTTGAAAACCGTTGTGTCAGCAATGGCA
CCGGGGGTTCGAATCCCTCGCCCTCCGCtc
Downstream region at tRNA end position 
tgatatgtgt
Secondary structure (Cloverleaf model)
>W1510645441	Ser	TGA
                   t      GCtc tgatatgtgt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G C C A       G G G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TGTGTCAGCAATGGCACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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