The detailed information of tRNA gene sequence


Sequence ID>W1510645526
Genome IDCVOA01000330
Search identical group
Phylum/ClassChlamydiota
SpeciesChlamydia trachomatis H1IMS [CVOA]
Start position on genome 4230
End posion on genome 4321
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cattgcaaac
tRNA gene sequence 
GGAGAGCTGACCGAGTGGCCGAAGGTGCTCGCCTGCTAAGCGAGTATAGGGTGCAAACTC
TATCTGGGGTTCGAATCCCCAGCTCTCCGCCA
Downstream region at tRNA end position 
gtttattttt
Secondary structure (Cloverleaf model)
>W1510645526	Ser	GCT
                   c      GCCA gtttattttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     C - G          T A
                    T     A C C C C     A
      T G A        G      | | | | |     G
    G       G C C A       T G G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TATAGGGTGCAAACTCTATC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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