The detailed information of tRNA gene sequence


Sequence ID>C11109463
Genome IDCP002526
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesGlaciecola sp. 4H-3-7+YE-5 4H-3-7+YE-5 [CP002526]
Start position on genome 3795949
End posion on genome 3796025
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atttcaaaat
tRNA gene sequence 
GGCCCAATAGCTCAGTTGGTTAGAGCACCCGACTCATAATCGGTAGGTCCCCTGTTCAAG
TCAGGGTTGGGCCACCA
Downstream region at tRNA end position 
ttttttctcg
Secondary structure (Cloverleaf model)
>C11109463	Met	CAT
                   t      ACCA ttttttctcg
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     A - T          T G
                    T     G G G A C     A
      T G A        A      | | | | |     A
    T       C T C G       C C C T G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    C   T
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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