The detailed information of tRNA gene sequence


Sequence ID>C11111366
Genome IDFQ859181
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesHyphomicrobium sp. MC1 [FQ859181]
Start position on genome 812148
End posion on genome 812237
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgaaccggac
tRNA gene sequence 
GGAGAGATGGCCGAGTGGTTGAAGGCGCACGCCTGGAACGCGTGTAGGCTCGCAAGGGTC
TCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
atttgacgtc
Secondary structure (Cloverleaf model)
>C11111366	Ser	GGA
                   c      GCCA atttgacgtc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TAGGCTCGCAAGGGTCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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