The detailed information of tRNA gene sequence


Sequence ID>C11111367
Genome IDFQ859181
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesHyphomicrobium sp. MC1 [FQ859181]
Start position on genome 1110773
End posion on genome 1110865
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
attgatttgg
tRNA gene sequence 
GGAGACGTGGCCGAGTGGCTGAAGGCAACGGTTTGCTAAATCGTCATACGCTTTAAAGGC
GTATCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
gtaccattgc
Secondary structure (Cloverleaf model)
>C11111367	Ser	GCT
                   g      GCCA gtaccattgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        A     CATACGCTTTAAAGGCGTATC
                    A - T
                    C - G
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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