The detailed information of tRNA gene sequence


Sequence ID>C11111371
Genome IDFQ859181
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesHyphomicrobium sp. MC1 [FQ859181]
Start position on genome 1560265
End posion on genome 1560341
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gagcgcaagt
tRNA gene sequence 
CGGGGCGTAGCTCAGCCTGGTAGAGCATCTGCTTTGGGAGCAGAGGGTCGCGTGTTCGAA
TCATGTCGCCCCGACCA
Downstream region at tRNA end position 
atattttctg
Secondary structure (Cloverleaf model)
>C11111371	Pro	TGG
                   t      ACCA atattttctg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T G T A C     A
      C G A        A      + | + | |     G
    C       C T C G       G C G T G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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