The detailed information of tRNA gene sequence


Sequence ID>C11111387
Genome IDFQ859181
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesHyphomicrobium sp. MC1 [FQ859181]
Start position on genome 4542658
End posion on genome 4542582
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
aacggcttgt
tRNA gene sequence 
GCCGCCTTAGCTCAGTTGGTTAGAGCGCTAGATTGTGGATCTAGAGGTCCCCGGTTCAAC
TCTGGGAGGCGGTACCA
Downstream region at tRNA end position 
tttccaaatc
Secondary structure (Cloverleaf model)
>C11111387	His	GTG
                   t      ACCA tttccaaatc
                     G + T
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A          T C
                    T     G G G T C     A
      T G A        A      | | | + |     A
    T       C T C G       C C C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    G - C
                    A - T
                  T       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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