The detailed information of tRNA gene sequence


Sequence ID>C11111393
Genome IDFQ859181
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesHyphomicrobium sp. MC1 [FQ859181]
Start position on genome 2795329
End posion on genome 2795234
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aatggccgat
tRNA gene sequence 
GGAGGAGAATCGTCCCCGGTGGGGCGTTCGGACTTCAAATCCGAGTGGGGCAGCGAGCCT
GCCCTTGGTGGGTTCGACTCCCATTCTCCTCCGCCA
Downstream region at tRNA end position 
agcgccagaa
Secondary structure (Cloverleaf model)
>C11111393	SeC	TCA
                   t      GCCA agcgccagaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T          T C
                    A     T A C C C     A
      C C C        T      + | | | |     G
    G       C T G C       G T G G G     C
    G       | + | |                 T T
    T       G G C G
      G G          T     GTGGGGCAGCGAGCCTGCCCTTG
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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