The detailed information of tRNA gene sequence


Sequence ID>C11111413
Genome IDCP002343
Search identical group
Phylum/ClassActinomycetota
SpeciesIntrasporangium calvum DSM 43043 [CP002343]
Start position on genome 334547
End posion on genome 334636
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcacgagtgg
tRNA gene sequence 
GGAGGCGTCGCATAGTGGCCTAGTGCGCCCGCCTGCTAAGCGGGTTGAGGATAAAACCTC
TCGCGGGTTCAAATCCCGCCGCCTCCGCCA
Downstream region at tRNA end position 
gacgaagaag
Secondary structure (Cloverleaf model)
>C11111413	Ser	GCT
                   g      GCCA gacgaagaag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C G C C C     A
      T G A        C      | | | | |     A
    G       T A C G       G C G G G     C
    G       + | | |                 T T
    C       G T G C
      C T A        G     TTGAGGATAAAACCTCTC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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