The detailed information of tRNA gene sequence


Sequence ID>C11111454
Genome IDCP002343
Search identical group
Phylum/ClassActinomycetota
SpeciesIntrasporangium calvum DSM 43043 [CP002343]
Start position on genome 329489
End posion on genome 329399
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cggcgcactt
tRNA gene sequence 
GGAGGGCTCGCATAGTGGCCTAGTGCGGCGGTCTTGAAAACCGCTATGGGTTCATAGCCC
ATCGTGGGTTCGAATCCCACGCCCTCCGCCA
Downstream region at tRNA end position 
gtgccgccgg
Secondary structure (Cloverleaf model)
>C11111454	Ser	TGA
                   t      GCCA gtgccgccgg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G          T A
                    T     C A C C C     A
      T G A        C      | | | | |     G
    G       T A C G       G T G G G     C
    G       + | | |                 T T
    C       G T G C
      C T A        G     TATGGGTTCATAGCCCATC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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