The detailed information of tRNA gene sequence


Sequence ID>C11111477
Genome IDCP002353
Search identical group
Phylum/ClassPlanctomycetota
SpeciesIsosphaera pallida ATCC 43644 [CP002353]
Start position on genome 5296943
End posion on genome 5297031
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atgtgcagtc
tRNA gene sequence 
GGAGAGGTGACCGAGAGGCCGAAGGTGCGGCACTGGAAATGCCGTGTACGCCAAAAGCGT
ACCGAGGGTTCGAATCCCTCCCTCTCCGCtc
Downstream region at tRNA end position 
agacccaact
Secondary structure (Cloverleaf model)
>C11111477	Ser	GGA
                   c      GCtc agacccaact
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TGTACGCCAAAAGCGTACC
                    C - G
                    G - C
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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