The detailed information of tRNA gene sequence


Sequence ID>C11111573
Genome IDCP002810
Search identical group
Phylum/ClassActinomycetota
SpeciesIsoptericola variabilis 225 [CP002810]
Start position on genome 3103470
End posion on genome 3103379
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccggtcgcga
tRNA gene sequence 
GGAGACGTCGCATAGTCTGGTCTAGTGCGCCACCCTGCTAAGGTGGTAACGGGGCAACCC
GTTCGCGGGTTCAAATCCCGCCGTCTCCGCCA
Downstream region at tRNA end position 
ggaaggctcc
Secondary structure (Cloverleaf model)
>C11111573	Ser	GCT
                   a      GCCA ggaaggctcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C G C C C     A
    C T G A        C      | | | | |     A
  T         T A C G       G C G G G     C
  G         + | | |                 T T
  G         G T G C
    T C T A        G     TAACGGGGCAACCCGTTC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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