The detailed information of tRNA gene sequence


Sequence ID>C11113729
Genome IDCP002371
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Liberibacter solanacearum CLso-ZC1 [CP002371]
Start position on genome 979487
End posion on genome 979563
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tatatggttt
tRNA gene sequence 
CGGAGTGTAGCGCAGCTTGGTAGCGCATCTGGTTTGGGACCAGGGGGTCGGGAGTTCGAA
TCTCTCCACTCCGACCA
Downstream region at tRNA end position 
cgtattagta
Secondary structure (Cloverleaf model)
>C11113729	Pro	TGG
                   t      ACCA cgtattagta
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     C T C T C     A
      C G A        A      | + | | |     G
    T       C G C G       G G G A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T + G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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