The detailed information of tRNA gene sequence


Sequence ID>C11114433
Genome IDCP002630
Search identical group
Phylum/ClassDeinococcota
SpeciesMarinithermus hydrothermalis DSM 14884 [CP002630]
Start position on genome 1132399
End posion on genome 1132489
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cggagccctt
tRNA gene sequence 
GGAGGGGTGCCGGAGCGGTCGAACGGGACGGTCTCGAAAACCGTTGTACCCATCTCGGGT
ACCGTGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
acagcccgcc
Secondary structure (Cloverleaf model)
>C11114433	Ser	CGA
                   t      GCCA acagcccgcc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G G C C       G T G G G     C
    G         | | |                 T T
    T       A C G G
      C G A        G     TGTACCCATCTCGGGTACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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