The detailed information of tRNA gene sequence


Sequence ID>C11114440
Genome IDCP002630
Search identical group
Phylum/ClassDeinococcota
SpeciesMarinithermus hydrothermalis DSM 14884 [CP002630]
Start position on genome 1641160
End posion on genome 1641235
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cgaggcgtag
tRNA gene sequence 
GGGCCGTTAGCTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGGGTTGGAGGTTCGAGT
CCTTCACGGCCCGCCA
Downstream region at tRNA end position 
cccacagccc
Secondary structure (Cloverleaf model)
>C11114440	Trp	CCA
                   g      GCCA cccacagccc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A          T G
                    T     C T T C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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