The detailed information of tRNA gene sequence


Sequence ID>C11114453
Genome IDCP002630
Search identical group
Phylum/ClassDeinococcota
SpeciesMarinithermus hydrothermalis DSM 14884 [CP002630]
Start position on genome 1297257
End posion on genome 1297181
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tcccgcccgt
tRNA gene sequence 
CGGGGCGTAGCGCAGGCCGGCAGCGCACCTGCTTTGGGAGCAGGGGGTCACAGGTTCAAA
TCCTGTCGCCCCGACCA
Downstream region at tRNA end position 
ggaccgcggg
Secondary structure (Cloverleaf model)
>C11114453	Pro	TGG
                   t      ACCA ggaccgcggg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T G T C C     A
      G G A        A      | | | | |     A
    C       C G C G       A C A G G     C
    C       | | | |                 T T
    G       G C G C
      G C A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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