The detailed information of tRNA gene sequence


Sequence ID>C11114456
Genome IDCP002630
Search identical group
Phylum/ClassDeinococcota
SpeciesMarinithermus hydrothermalis DSM 14884 [CP002630]
Start position on genome 1173451
End posion on genome 1173361
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgaacggcac
tRNA gene sequence 
GGAGAGGTGCCCGAGTGGTTGAAGGGGTACGCCTGGAGAGCGTATGTACGGCCTAGCCGT
ACCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
aaaccgcccc
Secondary structure (Cloverleaf model)
>C11114456	Ser	GGA
                   c      GCCA aaaccgcccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C C       G C G G G     C
    G         | | |                 T T
    T       A G G G
      T G A        G     TGTACGGCCTAGCCGTACC
                    T - A
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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