The detailed information of tRNA gene sequence


Sequence ID>C11115687
Genome IDCP002876
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesNitrosomonas sp. Is79A3 [CP002876]
Start position on genome 379017
End posion on genome 378925
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tccagcaacc
tRNA gene sequence 
GGAGAGGTACCGAAGCGGTCACAACGGCGCTGACTCGAAATCAGTTGGTCAGGGTAACTT
GGCACATGGGTTCGAATCCCATCCTCTCCGCCA
Downstream region at tRNA end position 
ataaatcatc
Secondary structure (Cloverleaf model)
>C11115687	Ser	CGA
                   c      GCCA ataaatcatc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T A C C C     A
    G C G A        A      | | | | |     G
  G         A G C C       A T G G G     C
  T           | | |                 T T
  C         A C G G
    A C A          C     TGGTCAGGGTAACTTGGCAC
                    G + T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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