The detailed information of tRNA gene sequence


Sequence ID>C11116269
Genome IDCP002821
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesAfipia carboxidovorans OM4 [CP002821]
Start position on genome 3459056
End posion on genome 3458967
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
caggcgccac
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTTGAAGGCGCACGCCTGGAAAGTGTGTATACGGGCAACCGTA
TCGCGGGTTCGAATCCCGCTCTCTCCGCCA
Downstream region at tRNA end position 
gaaatccagg
Secondary structure (Cloverleaf model)
>C11116269	Ser	GGA
                   c      GCCA gaaatccagg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATACGGGCAACCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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