The detailed information of tRNA gene sequence


Sequence ID>C11116287
Genome IDCP002821
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesAfipia carboxidovorans OM4 [CP002821]
Start position on genome 2161888
End posion on genome 2161812
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
acgggccttt
tRNA gene sequence 
CGGGGTATAGCGTAGCCTGGTAGCGCGGCGGTTTTGGGTACCGCAGGTCGGAGGTTCGAA
TCCTCCTGCCCCGACCA
Downstream region at tRNA end position 
cttcatccta
Secondary structure (Cloverleaf model)
>C11116287	Pro	TGG
                   t      ACCA cttcatccta
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T A
                    T     C C T C C     A
      C G A        A      | | | | |     G
    C       T G C G       G G A G G     C
    T       + | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  T       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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