The detailed information of tRNA gene sequence


Sequence ID>C11116311
Genome IDCP002361
Search identical group
Phylum/ClassDeinococcota
SpeciesOceanithermus profundus DSM 14977 [CP002361]
Start position on genome 1122902
End posion on genome 1122976
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ggagccccgt
tRNA gene sequence 
GGGGCCGTAGCTCAGAGGGAGAGCACCTGCCTTGCAAGCAGGGGGTCAGCGGTTCGAATC
CGCTCGGCTCCACCA
Downstream region at tRNA end position 
aaacggccgg
Secondary structure (Cloverleaf model)
>C11116311	Ala	TGC
                   t      ACCA aaacggccgg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     T C G C C     A
        G A        A      | | | | |     G
      A     C T C G       A G C G G     C
      G     | | | |                 T T
      G     G A G C
        G A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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