The detailed information of tRNA gene sequence


Sequence ID>C11116315
Genome IDCP002361
Search identical group
Phylum/ClassDeinococcota
SpeciesOceanithermus profundus DSM 14977 [CP002361]
Start position on genome 1463620
End posion on genome 1463696
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aggttcgcgc
tRNA gene sequence 
GGGCGGTTAGCTCAGATGGCTAGAGCGCTCGCTTCACACGCGAGAGGTCGGAGGTTCAAG
TCCTCTACCGCCCACCA
Downstream region at tRNA end position 
aagacccggc
Secondary structure (Cloverleaf model)
>C11116315	Val	CAC
                   c      ACCA aagacccggc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          T G
                    T     T C T C C     A
      A G A        A      + | | | |     A
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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