The detailed information of tRNA gene sequence


Sequence ID>C11116320
Genome IDCP002361
Search identical group
Phylum/ClassDeinococcota
SpeciesOceanithermus profundus DSM 14977 [CP002361]
Start position on genome 2170254
End posion on genome 2170328
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ccagccagaa
tRNA gene sequence 
GGCCCCTTCGACTAGCGGTTAGGTCACCGCCCTTTCAAGGCGGCGGCACGGGTTCGAGTC
CCGTAGGGGTCACCA
Downstream region at tRNA end position 
aagcgcgctc
Secondary structure (Cloverleaf model)
>C11116320	Glu	TTC
                   a      ACCA aagcgcgctc
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     T G C C C     A
      C G A        C      | | | | |     G
    G       T C A G       A C G G G     C
    G       + | | |                 T T
    T       G G T C
      T A          A     CGGC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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