The detailed information of tRNA gene sequence


Sequence ID>C11116321
Genome IDCP002361
Search identical group
Phylum/ClassDeinococcota
SpeciesOceanithermus profundus DSM 14977 [CP002361]
Start position on genome 2170350
End posion on genome 2170425
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
agccgaacgc
tRNA gene sequence 
GGCCCCATCGTCTAGAGGCCTAGGACGCCGCCCTCTCACGGCGGTAACGGGGGTTCGAAT
CCCCCTGGGGTCACCA
Downstream region at tRNA end position 
gacggctcga
Secondary structure (Cloverleaf model)
>C11116321	Glu	CTC
                   c      ACCA gacggctcga
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     C C C C C     A
      A G A        C      | | | | |     G
    G       T C T G       G G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        G     TAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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