The detailed information of tRNA gene sequence


Sequence ID>C11116324
Genome IDCP002361
Search identical group
Phylum/ClassDeinococcota
SpeciesOceanithermus profundus DSM 14977 [CP002361]
Start position on genome 2221744
End posion on genome 2221820
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaccggacac
tRNA gene sequence 
GGGCCCTTAGCTCAGTTGGTCAGAGCAGTCGGCTCATAACCGATCGGTCGCAGGTTCAAG
TCCTGCAGGGCCCACCA
Downstream region at tRNA end position 
aaacgcccct
Secondary structure (Cloverleaf model)
>C11116324	Met	CAT
                   c      ACCA aaacgcccct
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     C G T C C     A
      T G A        A      | | | | |     A
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     CGGTC
                    G + T
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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