The detailed information of tRNA gene sequence


Sequence ID>C11116325
Genome IDCP002361
Search identical group
Phylum/ClassDeinococcota
SpeciesOceanithermus profundus DSM 14977 [CP002361]
Start position on genome 2137203
End posion on genome 2137113
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atgcggccag
tRNA gene sequence 
GGAGGGTTGGCCGAGCGGTTGAAGGCGGCGGTCTTGAAAACCGCTGTGGGCTCCGGGCCC
ACCGGGGGTTCGAATCCCTCACCCTCCGCCA
Downstream region at tRNA end position 
aaacgcaacg
Secondary structure (Cloverleaf model)
>C11116325	Ser	TGA
                   g      GCCA aaacgcaacg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TGTGGGCTCCGGGCCCACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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