The detailed information of tRNA gene sequence


Sequence ID>C11116328
Genome IDCP002361
Search identical group
Phylum/ClassDeinococcota
SpeciesOceanithermus profundus DSM 14977 [CP002361]
Start position on genome 1957703
End posion on genome 1957627
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
tccctcgcgg
tRNA gene sequence 
GCGCCCGTAGCTCAGTCGGATAGAGCAAGCGCCTCCTAAGCGCTAGGTCGCAGGTTCGAT
TCCTGCCGGGCGCACCA
Downstream region at tRNA end position 
gcgagcgggc
Secondary structure (Cloverleaf model)
>C11116328	Arg	CCT
                   g      ACCA gcgagcgggc
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T T
                    T     C G T C C     A
      T G A        A      | | | | |     G
    C       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTC
                    A - T
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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