The detailed information of tRNA gene sequence


Sequence ID>C11116333
Genome IDCP002361
Search identical group
Phylum/ClassDeinococcota
SpeciesOceanithermus profundus DSM 14977 [CP002361]
Start position on genome 1517115
End posion on genome 1517040
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cgttgcgtag
tRNA gene sequence 
GGGCCGCTAGCTCAACTGGCAGAGCACCGGTCTCCAAAACCGGGGGTTGGGGGTTCGAGT
CCTCCGCGGCCCGCCA
Downstream region at tRNA end position 
aacgccccag
Secondary structure (Cloverleaf model)
>C11116333	Trp	CCA
                   g      GCCA aacgccccag
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G          T G
                    T     C C T C C     A
      C A A        A      | | + | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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