The detailed information of tRNA gene sequence


Sequence ID>C11116335
Genome IDCP002361
Search identical group
Phylum/ClassDeinococcota
SpeciesOceanithermus profundus DSM 14977 [CP002361]
Start position on genome 1295437
End posion on genome 1295353
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
aaccgcccac
tRNA gene sequence 
GCGAGGATGGCGGAATTGGTAGACGCGCCAGACTTAGGATCTGGTGGCTTCGGCCGTGGG
GGTTCAAGTCCCCCTCCTCGCACCA
Downstream region at tRNA end position 
gagggttggg
Secondary structure (Cloverleaf model)
>C11116335	Leu	TAG
                   c      ACCA gagggttggg
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T          T G
                    T     C C C C C     A
      T A A        G      | | | | |     A
    T       G G C G       G G G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGGCTTCGGCCGT
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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