The detailed information of tRNA gene sequence


Sequence ID>C11116336
Genome IDCP002361
Search identical group
Phylum/ClassDeinococcota
SpeciesOceanithermus profundus DSM 14977 [CP002361]
Start position on genome 1289009
End posion on genome 1288933
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ttttgcgcgt
tRNA gene sequence 
CGGGGAGTAGCGCAGTCCGGCAGCGCACCTCGTTCGGGACGAGGGGGTCGGAGGTTCAAA
TCCTCTCTCCCCGACCA
Downstream region at tRNA end position 
agcgaaggag
Secondary structure (Cloverleaf model)
>C11116336	Pro	CGG
                   t      ACCA agcgaaggag
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T C T C C     A
      T G A        A      + | | | |     A
    C       C G C G       G G A G G     C
    C       | | | |                 T T
    G       G C G C
      G C A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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