The detailed information of tRNA gene sequence


Sequence ID>C11116337
Genome IDCP002361
Search identical group
Phylum/ClassDeinococcota
SpeciesOceanithermus profundus DSM 14977 [CP002361]
Start position on genome 1238803
End posion on genome 1238727
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ttccgtccta
tRNA gene sequence 
CGGGGCGTAGCGCAGTCCGGAAGCGCGCCTGCTTTGGGGGCAGGATGTCGCAGGTTCAAA
TCCTGCCGCCCCGACCA
Downstream region at tRNA end position 
gcttgcggga
Secondary structure (Cloverleaf model)
>C11116337	Pro	TGG
                   a      ACCA gcttgcggga
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C G T C C     A
      T G A        A      | | | | |     A
    C       C G C G       G C A G G     C
    C       | | | |                 T T
    G       G C G C
      G A A        G     ATGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       G
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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