The detailed information of tRNA gene sequence


Sequence ID>C11116339
Genome IDCP002361
Search identical group
Phylum/ClassDeinococcota
SpeciesOceanithermus profundus DSM 14977 [CP002361]
Start position on genome 1238611
End posion on genome 1238536
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
cgcctcgcat
tRNA gene sequence 
GCGCCCGTAGCTCAGGGGACAGAGCAGCCGCCTTCTAAGCGGTAGGTCGGGGGTTCGAAT
CCTCCCGGGCGCGCCA
Downstream region at tRNA end position 
cttttctggc
Secondary structure (Cloverleaf model)
>C11116339	Arg	TCT
                   t      GCCA cttttctggc
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C C T C C     A
      G G A        A      | | + | |     G
    G       C T C G       G G G G G     C
    G       | | | |                 T T
    A       G A G C
      C A          A     AGGTC
                    G + T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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