The detailed information of tRNA gene sequence


Sequence ID>C11116340
Genome IDCP002361
Search identical group
Phylum/ClassDeinococcota
SpeciesOceanithermus profundus DSM 14977 [CP002361]
Start position on genome 1212378
End posion on genome 1212289
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
agctgagcct
tRNA gene sequence 
GGAGGGGTGCCGGAGTGGTTGAACGGGCCGGTCTCGAAAACCGGTGTGTCCGTAAGGGCA
CCGCGGGTTCGAATCCCGCCCCCTCCGCCA
Downstream region at tRNA end position 
aaaaggccgc
Secondary structure (Cloverleaf model)
>C11116340	Ser	CGA
                   t      GCCA aaaaggccgc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G G C C       G C G G G     C
    G         | | |                 T T
    T       A C G G
      T G A        G     TGTGTCCGTAAGGGCACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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