The detailed information of tRNA gene sequence


Sequence ID>C11116341
Genome IDCP002361
Search identical group
Phylum/ClassDeinococcota
SpeciesOceanithermus profundus DSM 14977 [CP002361]
Start position on genome 1114320
End posion on genome 1114231
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aggtcggcat
tRNA gene sequence 
GGAGAGGTGCCCGAGTGGCTGAAGGGGCACGCCTGGAGAGCGTGTGTACGGGCAACCGTA
CCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
gaccgagccc
Secondary structure (Cloverleaf model)
>C11116341	Ser	GGA
                   t      GCCA gaccgagccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C C       G C G G G     C
    G         | | |                 T T
    C       A G G G
      T G A        G     TGTACGGGCAACCGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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