The detailed information of tRNA gene sequence


Sequence ID>C11116752
Genome IDCP002433
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPantoea sp. At-9b [CP002433]
Start position on genome 50134
End posion on genome 50040
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ctgcggtaaa
tRNA gene sequence 
GGAAGATCGTCGTCTCCGGTGAGGCGGTCGGATTTCAAATCCGATTGGGGCCGCCAGCGG
TCCCGGGCAGGTTCGACTCCTGTGATCTTCCGCCA
Downstream region at tRNA end position 
aattgcctct
Secondary structure (Cloverleaf model)
>C11116752	SeC	TCA
                   a      GCCA aattgcctct
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     T - A
                     C - G          T C
                    G     T G T C C     A
      C C T        T      + | | | |     G
    G       C T G C       G C A G G     C
    G       | + | |                 T T
    T       G G C G
      G A          G     TTGGGGCCGCCAGCGGTCCCGG
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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